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803712-79-0 分子结构
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2-[(2Z)-2-[(3,5-dimethyl-1H-pyrrol-2-yl)methylidene]-3-methoxy-2H-pyrrol-5-yl]-1H-indole; methanesulfonic acid

ChemBase编号:72485
分子式:C21H23N3O4S
平均质量:413.49002
单一同位素质量:413.14092723
SMILES和InChIs

SMILES:
c1ccc2c(c1)cc([nH]2)C1=N/C(=C\c2c(cc([nH]2)C)C)/C(=C1)OC.CS(=O)(=O)O
Canonical SMILES:
CS(=O)(=O)O.COC1=CC(=N/C/1=C\c1[nH]c(cc1C)C)c1cc2c([nH]1)cccc2
InChI:
InChI=1S/C20H19N3O.CH4O3S/c1-12-8-13(2)21-16(12)10-19-20(24-3)11-18(23-19)17-9-14-6-4-5-7-15(14)22-17;1-5(2,3)4/h4-11,21-22H,1-3H3;1H3,(H,2,3,4)/b19-10-;
InChIKey:
ZFKXDVMHNXPEIY-PEZBNFGJSA-N

引用这个纪录

CBID:72485 http://www.chembase.cn/molecule-72485.html

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名称和登记号

名称和登记号

名称 登记号
IUPAC标准名
2-[(2Z)-2-[(3,5-dimethyl-1H-pyrrol-2-yl)methylidene]-3-methoxy-2H-pyrrol-5-yl]-1H-indole; methanesulfonic acid
IUPAC传统名
2-[(5Z)-5-[(3,5-dimethyl-1H-pyrrol-2-yl)methylidene]-4-methoxypyrrol-2-yl]-1H-indole mesylate
别名
GX15-070
Obatoclax Mesylate
CAS号
803712-79-0
PubChem SID
162037410
PubChem CID
46930996

数据来源

数据来源

所有数据来源 商品来源 非商品来源
数据来源 数据ID 价格
Selleck Chemicals
S1057 external link 加入购物车 请登录
数据来源 数据ID
PubChem 46930996 external link

理论计算性质

理论计算性质

JChem
LogD (pH = 5.5) 3.0839715  LogD (pH = 7.4) 3.144098 
Log P 3.144921  摩尔折射率 100.2151 cm3
极化性 37.738808 Å3 极化表面积 53.17 Å2
可自由旋转的化学键 里宾斯基五规则 true 
Acid pKa 13.971781  质子受体
质子供体

分子性质

分子性质

理化性质 安全信息 药理学性质 产品相关信息 生物活性(PubChem)
溶解度
DMSO expand 查看数据来源
保存条件
-20°C expand 查看数据来源
作用靶点
Bcl-2 expand 查看数据来源
成盐信息
Mesylate expand 查看数据来源

详细说明

详细说明

Selleck Chemicals Selleck Chemicals
Selleck Chemicals -  S1057 external link
Research Area
Description Cancer
Biological Activity
Description Obatoclax (GX15-070) is an inhibitor of Bcl-2 with Ki of 0.22 μM.
Targets Bcl-2
IC50 0.22 μM (Ki) [1]
In Vitro Obatoclax completely inhibits Bak recovery of Mcl-1 at 5 μM in SK-Mel5 cells and overcomes resistance to ABT-373-induced apoptosis conferred by Mcl-1 in KB/Bcl-2 cells. [1] Obatoclax is a BH3 mimetic which binds to a broad spectrum of Bcl-2 family members, including Bcl-2, Bcl-xL, and Mcl-1. Obatoclax uniquely displaces BH3 domains by activation of the pocket of Mcl-1 followed by a triggering of apoptosis mediated by oligomerization of Bak and release of cytochrome c. Obatoclax is sensitive to Bcl-xL in cell lines lacking it or showing low expression. It shows low cytotoxicity to Mcl-1, Bcl-2, and Bcl-xL in all the strongly-expressed cell lines. Obatoclax inhibits multiple myeloma (MM) cell lines (KMS12PE, KMS18, MY5, etc.) with IC50 values ranging from 52 to 1100 nM and the inhibition is umimpaired even in the presence of IL-6 or IGF-1, which are resistance to cytotoxic agents, at a concentration of 150 nM. Obatoclax enhances the antimyeloma activity induced by melphalan, dexamethasone, or bortezomib. [2] Obatoclax potentiates TRAIL (tumor necrosis factor-related apoptosis-inducing ligand)-mediated apoptosis by unsequestering Bak and Bim from Bcl-2/Bcl-xL or Mcl-1 proteins in PANC-1 and BxPC-3 cells. [3]
In Vivo Obatoclax also exhibits high antitumor activity in SCID mice bearing human C33A cerivical carcinoma tumors at a dose of 0.5 mg/kg. [1]
Clinical Trials Obatoclax, combined with rituximab and bendamustine, is currently under Phase I/II clinical trials in relapsed or refractory indolent non-hodgkin's lymphoma.
Features Obatoclax is a potential first-in-class small molecule antagonist of Bcl-2 designed to inhibit all relevant members of the Bcl-2 family of proteins, including the dominant member, Mcl-1.
Protocol
Kinase Assay [1]
Bcl-2 Binding affinity calculation A predicted binding affinity for Obatoclax binding to BCL-2 is calculated using the SIE scoring function. [4] As a control in determining the reliability of the calculation, predicted binding affinities Ki) are calculated for a set of 12 small molecules with experimentally measured binding affinities to BCL-2.
Cell Assay [2]
Cell Lines Human MM cells (HMCLs), peripheral blood lymphocytes (PBLs), bone marrow stromal cells (BMSCs)
Concentrations ~10 μM
Incubation Time 48-72 hours
Methods Obatoclax is dissolved in DMSO at a stock concentration of 5 mM. Cell viability is assayed by MTT. Human MM cells (HMCLs), peripheral blood lymphocytes (PBLs), bone marrow stromal cells (BMSCs) are seeded in 96-well plates at a density of 2 × 104 per well for HMCLs or 5~10 × 103 for PBLs. Various concentrations of Obatoclax are added to the cells, with or without IGF-1 (50 ng/mL) or IL-6 (10 ng/mL). Cells are incubated for 48-72 hours and cell viability is determined.
Animal Study [1]
Animal Models Female BALB/c or CB17 SCID/SCID mice bearing SW480, C33A, PC3, and 4T1 cells are used.
Formulation Obatoclax (tartrate salt) is formulated in 9.6% polyethylene glycol 300, 0.4% polysorbate 20, and 5% dextrose; while for the 4T1 tumor model, Obatoclax is formulated at a concentration of 0.6 mg/mL in 9.48% polyethylene glycol, 0.38% polysorbate 20, 1.2 mg/mL mannitol, and 5% dextrose.
Doses 0.0313, 0.25, 0.5 and 2 mg/kg
Administration Administered intravenously (tail vein) once a day
References
[1] Nguyen M, et al. Proc Natl Acad Sci, 2007, 104(49), 19512-191517.
[2] Trudel S, et al. Blood, 2009, 113(2), 299-305.
[3] Huang S, et al. Clin Cancer Res, 2009, 15 (1), 150-159.
[4] Naim M, et al. J Chem Inf Model, 2007, 47(1), 122-133.

参考文献

参考文献

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专利

专利

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